Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015929482.1_cds_XP_016476749.1_68549
CDS Infomation

[gene=LOC107798294] [db_xref=GeneID:107798294] [protein=serine--tRNA ligase-like] [protein_id=XP_016476749.1] [location=complement(join(68186..68395,68596..68775,69819..70002,70140..70243,70826..71019,72212..72317,72400..72561,74283..74353,75068..75200))] [gbkey=CDS]
Sequence

ATGTTGGACATAAATCTGTTCAGAGAAGATAAGGGACATAATCCCGAGATCATTCGTGAA
TCTCAACGTCGTCGTTTTGCCGACGTCGGTCTCGTCGATCAGGTCATTCAACTCGACAAA
GAATGGCGTCAGCGCCAATTTGAGCTTGATAACTTGAGGAAAGATTTCAACAAGATCAAC
AAAGAAGTTGCCAGGCTAAAGATTTCTGGTGAGGATGCAAGTCACAAGATTAAGGACACT
GAAGAGAACAAGCAACTAACTGCAAAGAAAGAGGCAGAAGTGCAGGAGGCTCGAGCCGCT
TTATATTCAAAGTTGGAAATCATTGGAAACCTTGTGCACGATTCAGTGCCAGTTAGTAAT
GATGAGGCAAATAATGCTATAGTTCGATCTTGGGGAGAGAAGCGGACTGAGAAGGGTCTT
AAAAATCATGTTGATCTCGTTGAGCTTCTTGGAATTGCAGACATTAAAAAGGGTGCAAAT
GTTGCTGGAGGAAGAGGTTACTATTTGAAAGGGGATGGTGTACTTCTTAATCAAGCTTTA
ATTAATTTTGCTCTTAATTTCCTAAGGAAGAGGGGATATAATCCATTGCAGACACCATTC
TTCATGAGGAAAGAAATCATGGCAAAGTGTGCTCAGTTAGCTCAGTTTGATGAAGAACTT
TACAAGGTCACTGGTGAGGGAGATGACAAATATCTGATTGCCACTGCTGAACAACCTCTA
TGTGCTTATCATTTGGATGACTGGATTCATCCTTCACAGCTTCCGTTAAGGTATGCTGGA
TACTCGTCATGCTTCCGCAAAGAAGCTGGTTCACATGGACGAGATACTCTGGGAATTTTC
AGAGTACATCAATTTGAGAAAGTGGAACAGTTTTGTTTGACCAGTCCAAATGGCAATGAC
TCCTGGGACATGCATGAGGAGATGATTAAAAATTCGGAGGAATTCTTTCAACTGCTAAAG
ATTCCTTACCAAATTGTATCTATTGTTTCTGGCGCACTGAATGATGCAGCAGCAAAGAAG
TATGATCTAGAAGGTTGGTATCCTGCATCTTCGACTTACAGAGAGCTTGTGTCCTGCTCA
AACTGCACAGACTATCAGTCGAGGAAATTGGAAATTCGGTTTGGACAGAAGAAGGGTAAT
GAGCAAGCAAAACAATACGTGCATTTGTTGAACTCCACTCTTACAGCGACAGAGAGGACT
ATCTGTTGTATACTTGAGAACTACCAGAGGGAAGATGGAGTTGAGATTCCTGAAGTTCTA
CGTCCATACATGGATGGGGTGACATTCATGCCTTTCCAGACCCCTCCAGCAAAAGAAGCT
AAAGGAAAGAAGTCAAAGGCATGA

Peptide Sequence

PEP ID

XP_016476749.1
PEP Infomation

PREDICTED: serine--tRNA ligase-like [Nicotiana tabacum]
Sequence

MLDINLFREDKGHNPEIIRESQRRRFADVGLVDQVIQLDKEWRQRQFELDNLRKDFNKIN
KEVARLKISGEDASHKIKDTEENKQLTAKKEAEVQEARAALYSKLEIIGNLVHDSVPVSN
DEANNAIVRSWGEKRTEKGLKNHVDLVELLGIADIKKGANVAGGRGYYLKGDGVLLNQAL
INFALNFLRKRGYNPLQTPFFMRKEIMAKCAQLAQFDEELYKVTGEGDDKYLIATAEQPL
CAYHLDDWIHPSQLPLRYAGYSSCFRKEAGSHGRDTLGIFRVHQFEKVEQFCLTSPNGND
SWDMHEEMIKNSEEFFQLLKIPYQIVSIVSGALNDAAAKKYDLEGWYPASSTYRELVSCS
NCTDYQSRKLEIRFGQKKGNEQAKQYVHLLNSTLTATERTICCILENYQREDGVEIPEVL
RPYMDGVTFMPFQTPPAKEAKGKKSKA

Transcript Sequence

Gene sequence data has not been registered.